journal paper, indexed by WoS, indexed by Scopus
2013 (2 publications)
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J. Galgonek, M. Kruliš, D. Hoksza. On the Parallelization of the SProt Measure and the TM-score Algorithm, 3rd International Workshop on High Performance Bioinformatics and Biomedicine (HiBB), Rhodes Island, Greece, 7640, pp.: 238-247, Lecture Notes in Computer Science, Springer, ISSN: 0302-9743, 2013
J. Galgonek, T. Skopal, D. Hoksza. P3S: Protein Structure Similarity Search, 3rd International Workshop on High Performance Bioinformatics and Biomedicine (HiBB), Rhodes Island, Greece, 7640, pp.: 228-237, Lecture Notes in Computer Science, Springer, ISSN: 0302-9743, 2013
2012 (1 publication)
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J. Novák, J. Galgonek, D. Hoksza, T. Skopal. SimTandem: Similarity Search in Tandem Mass Spectra, SISAP, Toronto, Ontario, Canada, LNCS 7404, pp.: 242-243, Springer, 2012
2011 (3 publications)
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J. Galgonek, D. Hoksza, T. Skopal. SProt: sphere-based protein structure similarity algorithm, Proteome Science, 9(Supplment 1), pp.: S20, BioMed Central, ISSN: 1477-5956, 2011,
J. Novák, T. Skopal, D. Hoksza, J. Lokoč, J. Galgonek. Protein Sequences Identification using NM-tree, SISAP, Lipari, Italy, pp.: 125-126, ACM, ISBN: 978-1-4503-0795-6, 2011
J. Galgonek, D. Hoksza. On Metric Approximations of the SProt Measure, SISAP 2011: Fourth International Conference on Similarity Search and Applications, Lipari, Italy, pp.: 119-120, ACM, ISBN: 978-1-4503-0795-6, 2011
2010 (3 publications)
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D. Hoksza, J. Galgonek. Alignment-Based Extension to DDPIn Feature Extraction, International Journal of Computational Bioscience, (1), pp.: 79-87, Acta Press, ISSN: 1918-3909, 2010
J. Galgonek, D. Hoksza. SProt - From Local to Global Protein Structure Similarity, BIBM'10 International Workshop on Computational Proteomics, Hong Kong, China, pp.: 124-129, IEEE, ISBN: 978-1-4244-8302-0, 2010
J. Galgonek, T. Knap, M. Kruliš, M. Nečaský. SMILE - A Framework for Semantic Applications, On the Move to Meaningful Internet Systems Workshops, Hersonissou, Crete, Greece, pp.: 53-54, Springer, ISBN: 978-3-642-16960-1, 2010
2009 (3 publications)
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D. Hoksza, J. Galgonek. Density-Based Classification of Protein Structures Using Iterative TM-score, CSBW 2009 (workshop at BIBM 2009), Wahsington, D.C., USA, pp.: 87-93, IEEE, ISBN: 978-1-4244-5121-0, 2009
J. Galgonek. Tequila - a query language for the Semantic Web, DATESO 2009, Spindleruv Mlyn, Czech Republic, pp.: 105-118, Czech Technical University in Prague, ISBN: 978-80-01-04323-3, ISSN: 1613-0073, 2009
J. Galgonek, D. Hoksza. On the Effectiveness of Distances Measuring Protein Structure Similarity, SISAP 2009: Second international workshop on similarity search and applications, Prague, Czech Republic, pp.: 165-166, IEEE, ISBN: 978-0-7695-3765-8, 2009
2008 (1 publication)
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J. Galgonek. Query languages for the Semantic web, 2008
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