Department of Software Engineering
Faculty of Mathematics And Physics
Charles University in Prague
Room 209, 2nd floor
Malostranské nám. 25
118 00 Prague
Czech Republic
e-mail:
novak [at] ksi.mff.cuni.cz
jiri.novak [at] fit.cvut.cz
siret:
http://siret.cz/novak
academia.edu:
http://cuni.academia.edu/JiriNovak
linkedin:
cz.linkedin.com/pub/jiří-novák/70/b94/32a/
ksi:
http://www.ksi.mff.cuni.cz/~novak
old www:
http://siret.cz/novak/index_old.php
- Ph.D. in Software Systems (2013),
Faculty of Mathematics and Physics, Charles University in Prague, Czech Republic - Ing. in Computer Science (2009),
Faculty of Electrical Engineering, Czech Technical University in Prague, Prague, Czech Republic
- Computational Mass Spectrometry and Proteomics
- Metric and Non-metric Access Methods
- Database Indexing Techniques
- Similarity Search
Researcher (January 2011 - present)
Department of Software Engineering
Faculty of Mathematics and Physics
Charles University in Prague
25.6.2012 - 24.9.2012 - Eberhard-Karls-Universität Tübingen, WSI/ZBIT, Applied Bioinformatics Group, Sand 14, 72076 Tübingen
17.6.2012 - 22.6.2012 - The 4th MaxQuant Summer School in "Computational Mass Spectrometry-Based Proteomics"
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Member of SIRET Research Group
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Member of CSBMB (Czech Society For Biochemistry and Molecular Biology)
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Member of FOBIA (Czech Free & Open BioInformatic Association)
Review:
- SISAP 2012, 2010
- DATESO 2011, 2013
- Bioinformatics
Charles University in Prague, Faculty of Mathematics and Physics, Prague, Czech Republic
Lecturer (October 2009 – present)
- 2010 - teaching course "Database Systems"
- 2009 - teaching course "Internet"
- since 2012 - teaching course "Searching Web and Multimedia Databases"
- since 2011 - teaching course "Retrieval of Multimedia Content on the Web"
- September 2010 - The paper "Improving the Similarity Search of Tandem Mass Spectra using Metric Access Methods" was among four best papers and it was invited for publication in a special issue of the "Journal of Discrete Algorithms", published by Elsevier
- September 2009 - 2nd place in competition "Master Thesis of the Year", organised by ABRA Software a.s.
- March 2009 - Dean's Prize for Excellent Master Thesis, Czech Technical University in Prague, Faculty of Electrical Engineering