journal paper, indexed by WoS, indexed by Scopus
2013 (2 publications)
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J. Novák, T. Sachsenberg, D. Hoksza, T. Skopal, O. Kohlbacher. On Comparison of SimTandem with State-of-the-Art Peptide Identification Tools, Efficiency of Precursor Mass Filter and Dealing with Variable Modifications, Journal of Integrative Bioinformatics, 10(3), 2013
J. Novák, T. Sachsenberg, D. Hoksza, T. Skopal, O. Kohlbacher. A Statistical Comparison of SimTandem with State-of-the-Art Peptide Identification Tools, 7th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB), Salamanca, Spain, Advances in Intelligent and Soft-Computing (AISC), vol. 222, pp.: 101-109, Springer, 2013
2012 (5 publications)
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J. Novák, T. Skopal, D. Hoksza, J. Lokoč. Non-metric Similarity Search of Tandem Mass Spectra Including Posttranslational Modifications, Journal of Discrete Algorithms, 13, pp.: 19-31, Elsevier, ISSN: 1570-8667, 2012
J. Novák, D. Hoksza, J. Lokoč, T. Skopal. On Optimizing the Non-metric Similarity Search in Tandem Mass Spectra by Clustering, ISBRA, Dallas, TX, USA, LNBI 7292, pp.: 189-200, Springer, 2012
J. Novák, J. Galgonek, D. Hoksza, T. Skopal. SimTandem: Similarity Search in Tandem Mass Spectra, SISAP, Toronto, Ontario, Canada, LNCS 7404, pp.: 242-243, Springer, 2012
J. Lokoč, P. Čech, J. Novák, T. Skopal. Cut-region: A Compact Building Block For Hierarchical Metric Indexing, SISAP, Toronto, Ontario, Canada, LNCS 7404, pp.: 85-100, Springer, ISBN: 978-3-642-32152-8, ISSN: 0302-9743, 2012
J. Lokoč, D. Novák, M. Batko, T. Skopal. Visual Image Search: Feature Signatures or/and Global Descriptors, SISAP 2012, Toronto, Canada, LNCS 7404, pp.: 177-191, Springer, ISBN: 978-3-642-32152-8, ISSN: 0302-9743, 2012
2011 (1 publication)
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J. Novák, T. Skopal, D. Hoksza, J. Lokoč, J. Galgonek. Protein Sequences Identification using NM-tree, SISAP, Lipari, Italy, pp.: 125-126, ACM, ISBN: 978-1-4503-0795-6, 2011
2010 (3 publications)
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J. Novák, D. Hoksza. Similarity Search and Posttranslational Modifications in Tandem Mass Spectra, BIBM, Hong Kong, China, pp.: 845-846, IEEE, ISBN: 978-1-4244-8302-0, 2010
J. Novák, D. Hoksza. Parametrised Hausdorff Distance as a Non-Metric Similarity Model for Tandem Mass Spectrometry, DATESO, Štědronín - Plazy, Czech Republic, pp.: 1-12, CEUR proceedings, ISSN: 1613-0073, 2010
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