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PSB 2013 (Pacific Symposium on Biocomputing)

Research area: 
Bioinformatics & Chemoinformatics
Paper due: 
31.07.2013
Publisher: 
PubMed Central
Location: 
Hawai, USA

GAUK 154613

Name: 
Efficient Molecular Representation
Start year: 
2013
End year: 
2014

Many areas of chemical biology, e.g. drug discovery, largely rely on libraries of molecules for production processes. Since the space of all molecules, called the chemical space, is huge, those libraries contain only small subspace of the whole space. An alternative to statical libraries is dynamic exploration of the space. The exploration generates molecules dynamically based on paths between given molecules in the chemical space.

Investigators
Investigator: 
petr.skoda
Investigator role: 
Principal investigator

Petr Škoda

Name: 
Petr
Surname: 
Škoda
Homepage: 
http://siret.ms.mff.cuni.cz/members/skoda
Research interests: 
  • chemical space exploration
  • chemical space visualization
Type of member: 
Student
State: 
Active

BSB 2013

Research area: 
Bioinformatics & Chemoinformatics
Paper due: 
27.05.2013
Publisher: 
Springer
Location: 
Recife, Brazil

Efficient Indexing of Similarity Models with Inequality Symbolic Regression

Authors: 
T. Bartoš, T. Skopal, J. Moško
Indexed by WOS: 
Indexed by WOS
Indexed by SCOPUS: 
Indexed by SCOPUS
Type: 
Proceedings
State: 
Accepted
Language: 
EN
Conference/Journal name: 
Genetic and Evolutionary Computation Conference (GECCO) 2013
Publisher: 
ACM
Year: 
2013
ISBN: 
978-1-4503-1963-8

Chemical Space Visualization Using ViFrame

Authors: 
P. Škoda, D. Hoksza
Indexed by WOS: 
Not indexed by WOS
Indexed by SCOPUS: 
Indexed by SCOPUS
Type: 
Proceedings
State: 
Accepted
Language: 
EN
Conference/Journal name: 
International Conference on Computer and Information Science (ICIS 2013)
Publisher: 
IEEE
Year: 
2013
Pages: 
541 - 546
Location: 
Toki Messe, Niigata, Japan
ISBN: 
978-147990174-6

Dynamic Multimedia Exploration Using SIFT Matching

Authors: 
J. Lokoč, L. Navrátil, J. Toušek, T. Skopal
Indexed by WOS: 
Not indexed by WOS
Indexed by SCOPUS: 
Indexed by SCOPUS
Type: 
Proceedings
State: 
Accepted
Language: 
EN
Conference/Journal name: 
ACM ICMR
Publisher: 
ACM
Year: 
2013
Pages: 
305-306
Location: 
Dallas, Texas, USA
ISBN: 
978-1-4503-2033-7

Databáze 2013/2014

 

Organizace a zpracování dat II - 2012/2013

Zápočet bude udělen za aktivní účast na civčení.  Účast je povinná a evidována zde.

A Statistical Comparison of SimTandem with State-of-the-Art Peptide Identification Tools

Authors: 
J. Novák, T. Sachsenberg, D. Hoksza, T. Skopal, O. Kohlbacher
Indexed by WOS: 
Not indexed by WOS
Indexed by SCOPUS: 
Indexed by SCOPUS
Type: 
Proceedings
State: 
Published
Language: 
EN
Conference/Journal name: 
7th International Conference on Practical Applications of Computational Biology & Bioinformatics (PACBB)
Publisher: 
Springer
Year: 
2013
Volume: 
Advances in Intelligent and Soft-Computing (AISC), vol. 222
Pages: 
101-109
Location: 
Salamanca, Spain
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